St John’s College is an independent organisation. The College was founded under the Anglican tradition and is affiliated with The University of Queensland.

The Anglican Diocese of Brisbane acts as Trustee of the College.

St John’s College is governed by the Council with the Archbishop of Brisbane serving as Council President. Three members are appointed by the Diocesan Council, two are appointed by the Archbishop, two appointed by the Old Johnians’ Association, one member is appointed by The University of Queensland, and three individuals are nominated by the Council.

The Warden of the College also serves on the College Council. The Council appoints the Chair from its members.

The Council is responsible for appointing the Warden, determining the College’s mission and vision, approving the Strategic Plan, endorsing the annual budget and overseeing financial performance, and the overall governance of the College as set out by the Constitution.

The Warden of the College also serves as the Chief Executive Officer. Day-to-day administration is overseen by the College’s Senior Leadership Team.